| 1 | Tue 9 Aug 2016 | 1-0 v Macclesfield TownYork City 1-0 Macclesfield Town | National League |
| 2 | Sat 13 Aug 2016 | 1-1 v Boreham WoodYork City 1-1 Boreham Wood | National League |
| 3 | Tue 16 Aug 2016 | 1-6 v GatesheadGateshead 6-1 York City | National League |
| 4 | Sat 20 Aug 2016 | 1-2 v Forest Green RoversForest Green Rovers 2-1 York City | National League |
| 5 | Sat 27 Aug 2016 | 4-1 v WokingYork City 4-1 Woking | National League |
| 6 | Sat 3 Sep 2016 | 4-0 v Solihull MoorsYork City 4-0 Solihull Moors | National League |
| 7 | Tue 13 Sep 2016 | 0-0 v Tranmere RoversYork City 0-0 Tranmere Rovers | National League |
| 8 | Sat 17 Sep 2016 | 0-1 v Dover AthleticYork City 0-1 Dover Athletic | National League |
| 9 | Sat 1 Oct 2016 | 0-1 v Aldershot TownYork City 0-1 Aldershot Town | National League |
| 10 | Sat 8 Oct 2016 | 1-1 v Braintree TownBraintree Town 1-1 York City | National League |
| 11 | Sat 22 Oct 2016 | 1-1 v ChesterYork City 1-1 Chester | National League |
| 12 | Sat 29 Oct 2016 | 2-2 v Sutton UnitedYork City 2-2 Sutton United | National League |
| 13 | Sat 19 Nov 2016 | 0-2 v Dagenham & RedbridgeYork City 0-2 Dagenham & Redbridge | National League |
| 14 | Tue 22 Nov 2016 | 1-4 v Lincoln CityYork City 1-4 Lincoln City | National League |
| 15 | Sat 17 Dec 2016 | 0-0 v Torquay UnitedYork City 0-0 Torquay United | National League |
| 16 | Sat 7 Jan 2017 | 2-2 v Dover AthleticDover Athletic 2-2 York City | National League |
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