| 1 | Sat 11 Aug 2012 | 231-1 v Doncaster RoversDoncaster Rovers 1-1 York City | Capital One Cup First Round |
| 2 | Sat 18 Aug 2012 | 231-3 v Wycombe WanderersYork City 1-3 Wycombe Wanderers | npower League Two |
| 3 | Tue 21 Aug 2012 | 232-2 v MorecambeMorecambe 2-2 York City | npower League Two |
| 4 | Sat 25 Aug 2012 | 233-1 v BarnetBarnet 1-3 York City | npower League Two |
| 5 | Wed 19 Sep 2012 | 231-3 v Burton AlbionBurton Albion 3-1 York City | npower League Two |
| 6 | Sat 22 Sep 2012 | 230-0 v Cheltenham TownYork City 0-0 Cheltenham Town | npower League Two |
| 7 | Sat 29 Sep 2012 | 232-0 v Aldershot TownAldershot Town 0-2 York City | npower League Two |
| 8 | Tue 2 Oct 2012 | 230-2 v Fleetwood TownYork City 0-2 Fleetwood Town | npower League Two |
| 9 | Sat 6 Oct 2012 | 230-0 v Rotherham UnitedYork City 0-0 Rotherham United | npower League Two |
| 10 | Tue 9 Oct 2012 | 230-4 v Coventry CityYork City 0-4 Coventry City | Johnstone's Paint Trophy Second Round |
| 11 | Sat 17 Nov 2012 | 232-2 v Port ValePort Vale 2-2 York City | npower League Two |
| 12 | Sat 24 Nov 2012 | 230-2 v Torquay UnitedYork City 0-2 Torquay United | npower League Two |
| 13 | Sat 1 Dec 2012 | 233-2 v RochdaleRochdale 2-3 York City | npower League Two |
| 14 | Sat 8 Dec 2012 | 230-2 v Plymouth ArgylePlymouth Argyle 2-0 York City | npower League Two |
| 15 | Sat 15 Dec 2012 | 234-1 v Bristol RoversYork City 4-1 Bristol Rovers | npower League Two |
| 16 | Wed 26 Dec 2012 | 230-3 v ChesterfieldChesterfield 3-0 York City | npower League Two |
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