| 1 | Sat 6 Aug 2016 | 11-3 v Solihull MoorsSutton United 1-3 Solihull Moors | National League |
| 2 | Tue 9 Aug 2016 | 11-1 v Forest Green RoversForest Green Rovers 1-1 Sutton United | National League |
| 3 | Sat 13 Aug 2016 | 13-1 v Lincoln CityLincoln City 1-3 Sutton United | National League |
| 4 | Tue 16 Aug 2016 | 12-0 v Torquay UnitedSutton United 2-0 Torquay United | National League |
| 5 | Sat 20 Aug 2016 | 12-0 v Macclesfield TownSutton United 2-0 Macclesfield Town | National League |
| 6 | Sat 27 Aug 2016 | 10-4 v ChesterChester 4-0 Sutton United | National League |
| 7 | Mon 29 Aug 2016 | 11-0 v Dagenham & RedbridgeSutton United 1-0 Dagenham & Redbridge | National League |
| 8 | Sat 3 Sep 2016 | 10-1 v GatesheadGateshead 1-0 Sutton United | National League |
| 9 | Sat 10 Sep 2016 | 10-1 v WrexhamWrexham 1-0 Sutton United | National League |
| 10 | Tue 13 Sep 2016 | 11-2 v Braintree TownSutton United 1-2 Braintree Town | National League |
| 11 | Sat 17 Sep 2016 | 11-0 v Tranmere RoversSutton United 1-0 Tranmere Rovers | National League |
| 12 | Sat 24 Sep 2016 | 11-2 v EastleighEastleigh 2-1 Sutton United | National League |
| 13 | Sat 1 Oct 2016 | 11-0 v GuiseleySutton United 1-0 Guiseley | National League |
| 14 | Tue 4 Oct 2016 | 11-3 v Dover AthleticDover Athletic 3-1 Sutton United | National League |
| 15 | Sat 8 Oct 2016 | 14-1 v WokingSutton United 4-1 Woking | National League |
| 16 | Sat 22 Oct 2016 | 11-1 v SouthportSouthport 1-1 Sutton United | National League |
| 17 | Tue 25 Oct 2016 | 12-2 v Maidstone UnitedSutton United 2-2 Maidstone United | National League |
| 18 | Sat 29 Oct 2016 | 12-2 v York CityYork City 2-2 Sutton United | National League |
| 19 | Sat 5 Nov 2016 | 16-3 v DartfordDartford 3-6 Sutton United | Emirates FA Cup First Round |
| 20 | Sat 12 Nov 2016 | 10-0 v BarrowSutton United 0-0 Barrow | National League |
| 21 | Sat 19 Nov 2016 | 11-2 v North Ferriby UnitedNorth Ferriby United 2-1 Sutton United | National League |
| 22 | Tue 22 Nov 2016 | 10-1 v Boreham WoodBoreham Wood 1-0 Sutton United | National League |
| 23 | Sat 26 Nov 2016 | 12-0 v Aldershot TownSutton United 2-0 Aldershot Town | National League |
| 24 | Tue 29 Nov 2016 | 10-6 v Dover AthleticSutton United 0-6 Dover Athletic | National League |
| 25 | Sat 3 Dec 2016 | 12-1 v Cheltenham TownSutton United 2-1 Cheltenham Town | Emirates FA Cup Second Round |
| 26 | Sat 17 Dec 2016 | 11-0 v WrexhamSutton United 1-0 Wrexham | National League |
| 27 | Mon 26 Dec 2016 | 10-1 v BromleyBromley 1-0 Sutton United | National League |
| 28 | Sun 1 Jan 2017 | 12-0 v BromleySutton United 2-0 Bromley | National League |
| 29 | Sat 7 Jan 2017 | 10-0 v AFC WimbledonSutton United 0-0 AFC Wimbledon | Emirates FA Cup Third Round |
| 30 | Tue 10 Jan 2017 | 10-1 v Braintree TownBraintree Town 1-0 Sutton United | National League |
| 31 | Tue 17 Jan 2017 | 13-1 v AFC WimbledonAFC Wimbledon 1-3 Sutton United | Emirates FA Cup Third Round Replay |
| 32 | Sat 21 Jan 2017 | 11-1 v EastleighSutton United 1-1 Eastleigh | National League |
| 33 | Tue 24 Jan 2017 | 13-2 v WorthingSutton United 3-2 Worthing | FA Trophy Second Round Replay |
| 34 | Sun 29 Jan 2017 | 11-0 v Leeds UnitedSutton United 1-0 Leeds United | Emirates FA Cup Fourth Round |
| 35 | Sat 4 Feb 2017 | 10-0 v Boreham WoodSutton United 0-0 Boreham Wood | FA Trophy Third Round |
| 36 | Tue 7 Feb 2017 | 10-5 v Boreham WoodBoreham Wood 5-0 Sutton United | FA Trophy |
| 37 | Sat 11 Feb 2017 | 10-3 v Solihull MoorsSolihull Moors 3-0 Sutton United | National League |
| 38 | Tue 14 Feb 2017 | 11-2 v GuiseleyGuiseley 2-1 Sutton United | National League |
| 39 | Mon 20 Feb 2017 | 10-2 v ArsenalSutton United 0-2 Arsenal | Emirates FA Cup Fifth Round |
| 40 | Sat 25 Feb 2017 | 13-2 v Torquay UnitedTorquay United 2-3 Sutton United | National League |
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