| 1 | Sat 6 Aug 2016 | 100-3 v Dagenham & RedbridgeDagenham & Redbridge 3-0 Southport | National League |
| 2 | Tue 9 Aug 2016 | 100-3 v GatesheadSouthport 0-3 Gateshead | National League |
| 3 | Sat 13 Aug 2016 | 102-1 v WokingSouthport 2-1 Woking | National League |
| 4 | Tue 16 Aug 2016 | 101-3 v Macclesfield TownMacclesfield Town 3-1 Southport | National League |
| 5 | Sat 20 Aug 2016 | 100-4 v Lincoln CityLincoln City 4-0 Southport | National League |
| 6 | Sat 27 Aug 2016 | 101-1 v Tranmere RoversSouthport 1-1 Tranmere Rovers | National League |
| 7 | Mon 29 Aug 2016 | 101-5 v Forest Green RoversForest Green Rovers 5-1 Southport | National League |
| 8 | Sat 3 Sep 2016 | 100-1 v Dover AthleticSouthport 0-1 Dover Athletic | National League |
| 9 | Sat 10 Sep 2016 | 101-1 v EastleighEastleigh 1-1 Southport | National League |
| 10 | Tue 13 Sep 2016 | 101-4 v BarrowSouthport 1-4 Barrow | National League |
| 11 | Sat 25 Feb 2017 | 0-1 v ChesterSouthport 0-1 Chester | National League |
| 12 | Sat 4 Mar 2017 | 2-4 v Maidstone UnitedMaidstone United 4-2 Southport | National League |
| 13 | Sat 11 Mar 2017 | 1-2 v Torquay UnitedSouthport 1-2 Torquay United | National League |
| 14 | Sat 18 Mar 2017 | 230-2 v Braintree TownBraintree Town 2-0 Southport | National League |
| 15 | Tue 21 Mar 2017 | 3-5 v York CityYork City 5-3 Southport | National League |
| 16 | Sat 25 Mar 2017 | 1-0 v Boreham WoodSouthport 1-0 Boreham Wood | National League |
| 17 | Sat 1 Apr 2017 | 0-1 v GuiseleySouthport 0-1 Guiseley | National League |
| 18 | Tue 4 Apr 2017 | 1-2 v Macclesfield TownSouthport 1-2 Macclesfield Town | National League |
| 19 | Sat 29 Apr 2017 | 251-1 v Lincoln CitySouthport 1-1 Lincoln City | National League |
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