| 1 | Tue 23 Aug 2016 | 22-2 v West Bromwich AlbionNorthampton Town 2-2 West Bromwich Albion | EFL Cup Second Round |
| 2 | Sat 27 Aug 2016 | 21-1 v Coventry CityCoventry City 1-1 Northampton Town | Sky Bet League One |
| 3 | Sun 4 Sep 2016 | 23-2 v Milton Keynes DonsNorthampton Town 3-2 Milton Keynes Dons | Sky Bet League One |
| 4 | Sat 10 Sep 2016 | 22-0 v WalsallNorthampton Town 2-0 Walsall | Sky Bet League One |
| 5 | Sat 17 Sep 2016 | 21-3 v ChesterfieldChesterfield 3-1 Northampton Town | Sky Bet League One |
| 6 | Wed 21 Sep 2016 | 21-3 v Manchester UnitedNorthampton Town 1-3 Manchester United | EFL Cup Third Round |
| 7 | Sat 24 Sep 2016 | 24-0 v Southend UnitedNorthampton Town 4-0 Southend United | Sky Bet League One |
| 8 | Tue 27 Sep 2016 | 23-1 v Swindon TownSwindon Town 1-3 Northampton Town | Sky Bet League One |
| 9 | Sat 1 Oct 2016 | 22-3 v Bristol RoversNorthampton Town 2-3 Bristol Rovers | Sky Bet League One |
| 10 | Sat 8 Oct 2016 | 21-1 v Scunthorpe UnitedScunthorpe United 1-1 Northampton Town | Sky Bet League One |
| 11 | Sat 15 Oct 2016 | 21-3 v MillwallNorthampton Town 1-3 Millwall | Sky Bet League One |
| 12 | Tue 18 Oct 2016 | 20-3 v Peterborough UnitedPeterborough United 3-0 Northampton Town | Sky Bet League One |
| 13 | Sat 22 Oct 2016 | 24-2 v Shrewsbury TownShrewsbury Town 2-4 Northampton Town | Sky Bet League One |
| 14 | Sat 29 Oct 2016 | 23-2 v BuryNorthampton Town 3-2 Bury | Sky Bet League One |
| 15 | Sat 5 Nov 2016 | 26-0 v Harrow BoroughNorthampton Town 6-0 Harrow Borough | Emirates FA Cup First Round |
| 16 | Sat 12 Nov 2016 | 21-2 v GillinghamGillingham 2-1 Northampton Town | Sky Bet League One |
| 17 | Sat 19 Nov 2016 | 20-1 v Peterborough UnitedNorthampton Town 0-1 Peterborough United | Sky Bet League One |
| 18 | Tue 22 Nov 2016 | 20-1 v Bradford CityBradford City 1-0 Northampton Town | Sky Bet League One |
| 19 | Sat 18 Mar 2017 | 21-2 v Bolton WanderersBolton Wanderers 2-1 Northampton Town | Sky Bet League One |
| 20 | Sat 25 Mar 2017 | 20-0 v Oxford UnitedNorthampton Town 0-0 Oxford United | Sky Bet League One |
| 21 | Sat 1 Apr 2017 | 21-1 v RochdaleRochdale 1-1 Northampton Town | Sky Bet League One |
| 22 | Sat 8 Apr 2017 | 21-2 v Sheffield UnitedNorthampton Town 1-2 Sheffield United | Sky Bet League One |
| 23 | Fri 14 Apr 2017 | 20-3 v MillwallMillwall 3-0 Northampton Town | Sky Bet League One |
| 24 | Mon 17 Apr 2017 | 21-1 v Shrewsbury TownNorthampton Town 1-1 Shrewsbury Town | Sky Bet League One |
| 25 | Sat 22 Apr 2017 | 20-3 v BuryBury 3-0 Northampton Town | Sky Bet League One |
| 26 | Sun 30 Apr 2017 | 20-0 v GillinghamNorthampton Town 0-0 Gillingham | Sky Bet League One |
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