| 1 | Sat 3 Aug 2013 | 20-1 v York CityYork City 1-0 Northampton Town | Sky Bet League Two |
| 2 | Tue 6 Aug 2013 | 21-2 v Milton Keynes DonsNorthampton Town 1-2 Milton Keynes Dons | Capital One Cup First Round |
| 3 | Sat 10 Aug 2013 | 73-1 v Newport CountyNorthampton Town 3-1 Newport County | Sky Bet League Two |
| 4 | Sat 17 Aug 2013 | 20-2 v Southend UnitedSouthend United 2-0 Northampton Town | Sky Bet League Two |
| 5 | Sat 24 Aug 2013 | 21-2 v Torquay UnitedNorthampton Town 1-2 Torquay United | Sky Bet League Two |
| 6 | Sat 31 Aug 2013 | 20-1 v Bristol RoversBristol Rovers 1-0 Northampton Town | Sky Bet League Two |
| 7 | Tue 3 Sep 2013 | 20-2 v Milton Keynes DonsMilton Keynes Dons 2-0 Northampton Town | Johnstone's Paint Trophy Southern Area First Round |
| 8 | Sat 7 Sep 2013 | 21-1 v Scunthorpe UnitedNorthampton Town 1-1 Scunthorpe United | Sky Bet League Two |
| 9 | Sat 14 Sep 2013 | 21-2 v Exeter CityNorthampton Town 1-2 Exeter City | Sky Bet League Two |
| 10 | Sat 21 Sep 2013 | 20-3 v Mansfield TownMansfield Town 3-0 Northampton Town | Sky Bet League Two |
| 11 | Sat 28 Sep 2013 | 20-0 v MorecambeNorthampton Town 0-0 Morecambe | Sky Bet League Two |
| 12 | Sat 5 Oct 2013 | 22-0 v AFC WimbledonAFC Wimbledon 0-2 Northampton Town | Sky Bet League Two |
| 13 | Sat 12 Oct 2013 | 20-2 v Oxford UnitedOxford United 2-0 Northampton Town | Sky Bet League Two |
| 14 | Sat 19 Oct 2013 | 22-2 v Dagenham & RedbridgeNorthampton Town 2-2 Dagenham & Redbridge | Sky Bet League Two |
| 15 | Tue 22 Oct 2013 | 22-3 v RochdaleRochdale 3-2 Northampton Town | Sky Bet League Two |
| 16 | Tue 26 Nov 2013 | 20-0 v ChesterfieldChesterfield 0-0 Northampton Town | Sky Bet League Two |
| 17 | Sat 30 Nov 2013 | 21-0 v Accrington StanleyNorthampton Town 1-0 Accrington Stanley | Sky Bet League Two |
| 18 | Sat 7 Dec 2013 | 20-2 v Grimsby TownGrimsby Town 2-0 Northampton Town | FA Cup with Budweiser Second Round |
| 19 | Sat 14 Dec 2013 | 21-1 v BuryBury 1-1 Northampton Town | Sky Bet League Two |
| 20 | Sat 21 Dec 2013 | 21-4 v Wycombe WanderersNorthampton Town 1-4 Wycombe Wanderers | Sky Bet League Two |
| 21 | Thu 26 Dec 2013 | 20-1 v Burton AlbionBurton Albion 1-0 Northampton Town | Sky Bet League Two |
| 22 | Sun 29 Dec 2013 | 20-0 v PortsmouthPortsmouth 0-0 Northampton Town | Sky Bet League Two |
| 23 | Sat 4 Jan 2014 | 22-1 v Newport CountyNewport County 1-2 Northampton Town | Sky Bet League Two |
| 24 | Sat 11 Jan 2014 | 20-2 v York CityNorthampton Town 0-2 York City | Sky Bet League Two |
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