| 1 | Tue 16 Aug 2016 | 1-6 v GatesheadGateshead 6-1 York City | National League |
| 2 | Sat 20 Aug 2016 | 1-2 v Forest Green RoversForest Green Rovers 2-1 York City | National League |
| 3 | Sat 27 Aug 2016 | 4-1 v WokingYork City 4-1 Woking | National League |
| 4 | Mon 29 Aug 2016 | 1-2 v WrexhamWrexham 2-1 York City | National League |
| 5 | Sat 3 Sep 2016 | 4-0 v Solihull MoorsYork City 4-0 Solihull Moors | National League |
| 6 | Sat 10 Sep 2016 | 0-2 v Torquay UnitedTorquay United 2-0 York City | National League |
| 7 | Tue 13 Sep 2016 | 0-0 v Tranmere RoversYork City 0-0 Tranmere Rovers | National League |
| 8 | Sat 17 Sep 2016 | 0-1 v Dover AthleticYork City 0-1 Dover Athletic | National League |
| 9 | Sat 24 Sep 2016 | 0-2 v BarrowBarrow 2-0 York City | National League |
| 10 | Sat 29 Oct 2016 | 2-2 v Sutton UnitedYork City 2-2 Sutton United | National League |
| 11 | Tue 29 Nov 2016 | 1-1 v GuiseleyYork City 1-1 Guiseley | National League |
| 12 | Sat 11 Feb 2017 | 0-1 v Braintree TownBraintree Town 1-0 North Ferriby United | National League |
| 13 | Sat 18 Feb 2017 | 1-2 v Dover AthleticNorth Ferriby United 1-2 Dover Athletic | National League |
| 14 | Tue 21 Feb 2017 | 0-1 v Lincoln CityNorth Ferriby United 0-1 Lincoln City | National League |
| 15 | Sat 25 Feb 2017 | 2-1 v GuiseleyGuiseley 1-2 North Ferriby United | National League |
| 16 | Sat 4 Mar 2017 | 2-1 v WokingNorth Ferriby United 2-1 Woking | National League |
| 17 | Sat 11 Mar 2017 | 0-3 v BromleyBromley 3-0 North Ferriby United | National League |
| 18 | Sat 18 Mar 2017 | 1-4 v Solihull MoorsNorth Ferriby United 1-4 Solihull Moors | National League |
| 19 | Tue 21 Mar 2017 | 1-4 v Tranmere RoversNorth Ferriby United 1-4 Tranmere Rovers | National League |
| 20 | Sat 25 Mar 2017 | 1-5 v Sutton UnitedSutton United 5-1 North Ferriby United | National League |
| 21 | Sat 8 Apr 2017 | 212-4 v Boreham WoodNorth Ferriby United 2-4 Boreham Wood | National League |
| 22 | Fri 14 Apr 2017 | 212-1 v EastleighNorth Ferriby United 2-1 Eastleigh | National League |
| 23 | Mon 17 Apr 2017 | 211-3 v BarrowBarrow 3-1 North Ferriby United | National League |
| 24 | Sat 22 Apr 2017 | 210-3 v Aldershot TownNorth Ferriby United 0-3 Aldershot Town | National League |
| 25 | Sat 29 Apr 2017 | 210-2 v Torquay UnitedTorquay United 2-0 North Ferriby United | National League |
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