| 1 | Sat 3 Aug 2013 | 30-0 v Shrewsbury TownShrewsbury Town 0-0 Milton Keynes Dons | Sky Bet League One |
| 2 | Sat 31 Aug 2013 | 31-0 v Sheffield UnitedSheffield United 0-1 Milton Keynes Dons | Sky Bet League One |
| 3 | Tue 3 Sep 2013 | 32-0 v Northampton TownMilton Keynes Dons 2-0 Northampton Town | Johnstone's Paint Trophy Southern Area First Round |
| 4 | Sat 7 Sep 2013 | 31-1 v Swindon TownMilton Keynes Dons 1-1 Swindon Town | Sky Bet League One |
| 5 | Sat 14 Sep 2013 | 33-1 v Notts CountyMilton Keynes Dons 3-1 Notts County | Sky Bet League One |
| 6 | Sat 21 Sep 2013 | 31-2 v Peterborough UnitedPeterborough United 2-1 Milton Keynes Dons | Sky Bet League One |
| 7 | Sat 28 Sep 2013 | 34-1 v StevenageMilton Keynes Dons 4-1 Stevenage | Sky Bet League One |
| 8 | Sat 5 Oct 2013 | 32-3 v GillinghamGillingham 3-2 Milton Keynes Dons | Sky Bet League One |
| 9 | Tue 8 Oct 2013 | 31-2 v StevenageStevenage 2-1 Milton Keynes Dons | Johnstone's Paint Trophy Southern Area Second Round |
| 10 | Sat 12 Oct 2013 | 31-2 v Leyton OrientLeyton Orient 2-1 Milton Keynes Dons | Sky Bet League One |
| 11 | Sat 19 Oct 2013 | 33-2 v Rotherham UnitedMilton Keynes Dons 3-2 Rotherham United | Sky Bet League One |
| 12 | Tue 22 Oct 2013 | 30-1 v Carlisle UnitedMilton Keynes Dons 0-1 Carlisle United | Sky Bet League One |
| 13 | Sat 26 Oct 2013 | 32-3 v Tranmere RoversTranmere Rovers 3-2 Milton Keynes Dons | Sky Bet League One |
| 14 | Sat 2 Nov 2013 | 31-0 v WalsallMilton Keynes Dons 1-0 Walsall | Sky Bet League One |
| 15 | Sat 9 Nov 2013 | 34-1 v FC Halifax TownMilton Keynes Dons 4-1 FC Halifax Town | FA Cup with Budweiser First Round |
| 16 | Sat 23 Nov 2013 | 32-3 v Bradford CityMilton Keynes Dons 2-3 Bradford City | Sky Bet League One |
| 17 | Tue 26 Nov 2013 | 31-3 v Colchester UnitedColchester United 3-1 Milton Keynes Dons | Sky Bet League One |
| 18 | Sat 30 Nov 2013 | 31-3 v Coventry CityMilton Keynes Dons 1-3 Coventry City | Sky Bet League One |
| 19 | Sat 7 Dec 2013 | 31-0 v Dover AthleticMilton Keynes Dons 1-0 Dover Athletic | FA Cup with Budweiser Second Round |
| 20 | Sat 14 Dec 2013 | 32-0 v Wolverhampton WanderersWolverhampton Wanderers 0-2 Milton Keynes Dons | Sky Bet League One |
| 21 | Sat 21 Dec 2013 | 33-0 v Port ValeMilton Keynes Dons 3-0 Port Vale | Sky Bet League One |
| 22 | Thu 26 Dec 2013 | 32-0 v Crawley TownCrawley Town 0-2 Milton Keynes Dons | Sky Bet League One |
| 23 | Sun 29 Dec 2013 | 31-3 v BrentfordBrentford 3-1 Milton Keynes Dons | Sky Bet League One |
| 24 | Wed 1 Jan 2014 | 30-0 v Colchester UnitedMilton Keynes Dons 0-0 Colchester United | Sky Bet League One |
| 25 | Sat 4 Jan 2014 | 33-3 v Wigan AthleticWigan Athletic 3-3 Milton Keynes Dons | FA Cup with Budweiser Third Round |
| 26 | Sat 11 Jan 2014 | 33-2 v Shrewsbury TownMilton Keynes Dons 3-2 Shrewsbury Town | Sky Bet League One |
| 27 | Tue 14 Jan 2014 | 31-3 v Wigan AthleticMilton Keynes Dons 1-3 Wigan Athletic | FA Cup with Budweiser Third Round Replay |
| 28 | Sat 18 Jan 2014 | 32-2 v Bristol CityBristol City 2-2 Milton Keynes Dons | Sky Bet League One |
| 29 | Tue 21 Jan 2014 | 30-2 v Crewe AlexandraCrewe Alexandra 2-0 Milton Keynes Dons | Sky Bet League One |
| 30 | Tue 28 Jan 2014 | 30-3 v Carlisle UnitedCarlisle United 3-0 Milton Keynes Dons | Sky Bet League One |
| 31 | Sat 1 Feb 2014 | 30-1 v Tranmere RoversMilton Keynes Dons 0-1 Tranmere Rovers | Sky Bet League One |
| 32 | Sat 8 Feb 2014 | 33-0 v WalsallWalsall 0-3 Milton Keynes Dons | Sky Bet League One |
| 33 | Sat 15 Feb 2014 | 32-1 v Oldham AthleticMilton Keynes Dons 2-1 Oldham Athletic | Sky Bet League One |
| 34 | Tue 18 Feb 2014 | 30-0 v Preston North EndMilton Keynes Dons 0-0 Preston North End | Sky Bet League One |
| 35 | Sat 22 Feb 2014 | 30-1 v Bradford CityBradford City 1-0 Milton Keynes Dons | Sky Bet League One |
| 36 | Tue 25 Feb 2014 | 32-1 v Oldham AthleticOldham Athletic 1-2 Milton Keynes Dons | Sky Bet League One |
| 37 | Sat 1 Mar 2014 | 30-1 v Sheffield UnitedMilton Keynes Dons 0-1 Sheffield United | Sky Bet League One |
| 38 | Sat 8 Mar 2014 | 32-1 v Swindon TownSwindon Town 1-2 Milton Keynes Dons | Sky Bet League One |
| 39 | Tue 11 Mar 2014 | 33-1 v Notts CountyNotts County 1-3 Milton Keynes Dons | Sky Bet League One |
| 40 | Sat 15 Mar 2014 | 30-2 v Peterborough UnitedMilton Keynes Dons 0-2 Peterborough United | Sky Bet League One |
| 41 | Sat 22 Mar 2014 | 33-2 v StevenageStevenage 2-3 Milton Keynes Dons | Sky Bet League One |
| 42 | Tue 25 Mar 2014 | 30-1 v GillinghamMilton Keynes Dons 0-1 Gillingham | Sky Bet League One |
| 43 | Sat 29 Mar 2014 | 30-1 v Wolverhampton WanderersMilton Keynes Dons 0-1 Wolverhampton Wanderers | Sky Bet League One |
| 44 | Sat 5 Apr 2014 | 32-1 v Coventry CityCoventry City 1-2 Milton Keynes Dons | Sky Bet League One |
| 45 | Sat 12 Apr 2014 | 30-2 v Crawley TownMilton Keynes Dons 0-2 Crawley Town | Sky Bet League One |
| 46 | Fri 18 Apr 2014 | 30-1 v Port ValePort Vale 1-0 Milton Keynes Dons | Sky Bet League One |
| 47 | Mon 21 Apr 2014 | 32-2 v BrentfordMilton Keynes Dons 2-2 Brentford | Sky Bet League One |
| 48 | Sat 26 Apr 2014 | 32-2 v Rotherham UnitedRotherham United 2-2 Milton Keynes Dons | Sky Bet League One |
| 49 | Sat 3 May 2014 | 31-3 v Leyton OrientMilton Keynes Dons 1-3 Leyton Orient | Sky Bet League One |
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