| 1 | Sat 25 Aug 2012 | 1-1 v Sutton UnitedSutton United 1-1 Maidenhead United | Blue Square Bet South |
| 2 | Mon 27 Aug 2012 | 1-1 v Staines TownMaidenhead United 1-1 Staines Town | Blue Square Bet South |
| 3 | Tue 4 Sep 2012 | 3-2 v FarnboroughMaidenhead United 3-2 Farnborough | Blue Square Bet South |
| 4 | Sat 8 Sep 2012 | 8-0 v Truro CityMaidenhead United 8-0 Truro City | Blue Square Bet South |
| 5 | Sat 15 Sep 2012 | 2-4 v EastleighEastleigh 4-2 Maidenhead United | Blue Square Bet South |
| 6 | Sat 29 Sep 2012 | 0-2 v Dover AthleticDover Athletic 2-0 Maidenhead United | Blue Square Bet South |
| 7 | Tue 2 Oct 2012 | 2-4 v AFC HornchurchMaidenhead United 2-4 AFC Hornchurch | Blue Square Bet South |
| 8 | Wed 9 Jan 2013 | 1-2 v Boreham WoodBoreham Wood 2-1 Maidenhead United | Blue Square Bet South |
| 9 | Sat 12 Jan 2013 | 1-2 v Tonbridge AngelsTonbridge Angels 2-1 Maidenhead United | Blue Square Bet South |
| 10 | Sat 9 Feb 2013 | 3-2 v Billericay TownMaidenhead United 3-2 Billericay Town | Blue Square Bet South |
| 11 | Tue 5 Mar 2013 | 1-2 v Dover AthleticMaidenhead United 1-2 Dover Athletic | Blue Square Bet South |
| 12 | Sat 9 Mar 2013 | 0-2 v EastleighMaidenhead United 0-2 Eastleigh | Blue Square Bet South |
| 13 | Tue 12 Mar 2013 | 0-2 v Basingstoke TownBasingstoke Town 2-0 Maidenhead United | Blue Square Bet South |
| 14 | Tue 26 Mar 2013 | 1-2 v Havant & WaterloovilleHavant & Waterlooville 2-1 Maidenhead United | Blue Square Bet South |
| 15 | Mon 22 Apr 2013 | 1-3 v Chelmsford CityChelmsford City 3-1 Maidenhead United | Blue Square Bet South |
| 16 | Sat 27 Apr 2013 | 0-1 v Billericay TownBillericay Town 1-0 Maidenhead United | Blue Square Bet South |
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