| 1 | Sat 11 Aug 2012 | 11-0 v Kidderminster HarriersLincoln City 1-0 Kidderminster Harriers | Blue Square Bet Premier |
| 2 | Tue 14 Aug 2012 | 11-2 v Cambridge UnitedCambridge United 2-1 Lincoln City | Blue Square Bet Premier |
| 3 | Sat 18 Aug 2012 | 11-2 v Newport CountyNewport County 2-1 Lincoln City | Blue Square Bet Premier |
| 4 | Sat 25 Aug 2012 | 12-3 v Macclesfield TownLincoln City 2-3 Macclesfield Town | Blue Square Bet Premier |
| 5 | Mon 27 Aug 2012 | 11-1 v GatesheadGateshead 1-1 Lincoln City | Blue Square Bet Premier |
| 6 | Sat 1 Sep 2012 | 11-1 v Ebbsfleet UnitedLincoln City 1-1 Ebbsfleet United | Blue Square Bet Premier |
| 7 | Tue 4 Sep 2012 | 11-2 v Alfreton TownLincoln City 1-2 Alfreton Town | Blue Square Bet Premier |
| 8 | Sat 8 Sep 2012 | 11-1 v AFC Telford UnitedAFC Telford United 1-1 Lincoln City | Blue Square Bet Premier |
| 9 | Sat 15 Sep 2012 | 13-2 v HydeLincoln City 3-2 Hyde | Blue Square Bet Premier |
| 10 | Sat 22 Sep 2012 | 10-1 v TamworthTamworth 1-0 Lincoln City | Blue Square Bet Premier |
| 11 | Tue 25 Sep 2012 | 12-1 v Nuneaton TownLincoln City 2-1 Nuneaton Town | Blue Square Bet Premier |
| 12 | Fri 28 Sep 2012 | 10-3 v Forest Green RoversForest Green Rovers 3-0 Lincoln City | Blue Square Bet Premier |
| 13 | Sat 6 Oct 2012 | 11-2 v Luton TownLincoln City 1-2 Luton Town | Blue Square Bet Premier |
| 14 | Tue 9 Oct 2012 | 10-0 v Mansfield TownMansfield Town 0-0 Lincoln City | Blue Square Bet Premier |
| 15 | Sat 27 Oct 2012 | 13-3 v Stockport CountyLincoln City 3-3 Stockport County | Blue Square Bet Premier |
| 16 | Sat 3 Nov 2012 | 11-1 v WalsallLincoln City 1-1 Walsall | FA Cup with Budweiser First Round |
| 17 | Tue 6 Nov 2012 | 13-0 v Braintree TownLincoln City 3-0 Braintree Town | Blue Square Bet Premier |
| 18 | Sat 10 Nov 2012 | 12-1 v BarrowBarrow 1-2 Lincoln City | Blue Square Bet Premier |
| 19 | Tue 13 Nov 2012 | 13-2 v WalsallWalsall 2-3 Lincoln City | FA Cup with Budweiser First Round Replay |
| 20 | Sat 17 Nov 2012 | 13-2 v Hereford UnitedLincoln City 3-2 Hereford United | Blue Square Bet Premier |
| 21 | Sat 1 Dec 2012 | 13-3 v Mansfield TownLincoln City 3-3 Mansfield Town | FA Cup with Budweiser Second Round |
| 22 | Tue 4 Dec 2012 | 10-2 v WokingLincoln City 0-2 Woking | Blue Square Bet Premier |
| 23 | Wed 12 Dec 2012 | 11-2 v Mansfield TownMansfield Town 2-1 Lincoln City | FA Cup with Budweiser Second Round Replay |
| 24 | Wed 26 Dec 2012 | 11-4 v Grimsby TownLincoln City 1-4 Grimsby Town | Blue Square Bet Premier |
| 25 | Tue 1 Jan 2013 | 11-1 v Grimsby TownGrimsby Town 1-1 Lincoln City | Blue Square Bet Premier |
| 26 | Sat 5 Jan 2013 | 11-1 v Ebbsfleet UnitedEbbsfleet United 1-1 Lincoln City | Blue Square Bet Premier |
| 27 | Tue 8 Jan 2013 | 12-4 v SouthportSouthport 4-2 Lincoln City | Blue Square Bet Premier |
| 28 | Sat 12 Jan 2013 | 12-4 v Newport CountyLincoln City 2-4 Newport County | Blue Square Bet Premier |
| 29 | Sat 23 Feb 2013 | 10-0 v BarrowLincoln City 0-0 Barrow | Blue Square Bet Premier |
| 30 | Tue 26 Feb 2013 | 10-1 v Mansfield TownLincoln City 0-1 Mansfield Town | Blue Square Bet Premier |
| 31 | Sat 2 Mar 2013 | 11-1 v WokingWoking 1-1 Lincoln City | Blue Square Bet Premier |
| 32 | Wed 6 Mar 2013 | 11-2 v Macclesfield TownMacclesfield Town 2-1 Lincoln City | Blue Square Bet Premier |
| 33 | Sat 9 Mar 2013 | 11-0 v SouthportLincoln City 1-0 Southport | Blue Square Bet Premier |
| 34 | Tue 12 Mar 2013 | 11-2 v WrexhamLincoln City 1-2 Wrexham | Blue Square Bet Premier |
| 35 | Sat 16 Mar 2013 | 10-1 v Nuneaton TownNuneaton Town 1-0 Lincoln City | Blue Square Bet Premier |
| 36 | Sat 23 Mar 2013 | 13-2 v AFC Telford UnitedLincoln City 3-2 AFC Telford United | Blue Square Bet Premier |
| 37 | Tue 26 Mar 2013 | 13-0 v Braintree TownBraintree Town 0-3 Lincoln City | Blue Square Bet Premier |
| 38 | Sat 30 Mar 2013 | 12-0 v Alfreton TownAlfreton Town 0-2 Lincoln City | Blue Square Bet Premier |
| 39 | Mon 1 Apr 2013 | 10-0 v Cambridge UnitedLincoln City 0-0 Cambridge United | Blue Square Bet Premier |
| 40 | Sat 6 Apr 2013 | 10-3 v Kidderminster HarriersKidderminster Harriers 3-0 Lincoln City | Blue Square Bet Premier |
| 41 | Tue 9 Apr 2013 | 10-3 v Luton TownLuton Town 3-0 Lincoln City | Blue Square Bet Premier |
| 42 | Sat 13 Apr 2013 | 12-1 v TamworthLincoln City 2-1 Tamworth | Blue Square Bet Premier |
| 43 | Sat 20 Apr 2013 | 15-1 v HydeHyde 1-5 Lincoln City | Blue Square Bet Premier |
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