| 1 | Sat 18 Aug 2012 | 2-0 v Hinckley UnitedHinckley United 0-2 Harrogate Town | Blue Square Bet North |
| 2 | Tue 21 Aug 2012 | 1-2 v AltrinchamHarrogate Town 1-2 Altrincham | Blue Square Bet North |
| 3 | Mon 27 Aug 2012 | 1-1 v Gainsborough TrinityGainsborough Trinity 1-1 Harrogate Town | Blue Square Bet North |
| 4 | Tue 18 Sep 2012 | 0-2 v GuiseleyGuiseley 2-0 Harrogate Town | Blue Square Bet North |
| 5 | Sat 29 Sep 2012 | 2-2 v Worcester CityWorcester City 2-2 Harrogate Town | Blue Square Bet North |
| 6 | Tue 20 Nov 2012 | 140-1 v Stalybridge CelticStalybridge Celtic 1-0 Harrogate Town | Blue Square Bet North |
| 7 | Sat 15 Dec 2012 | 195-0 v Hinckley UnitedHarrogate Town 5-0 Hinckley United | Blue Square Bet North |
| 8 | Wed 19 Dec 2012 | 190-2 v ChesterChester 2-0 Harrogate Town | Blue Square Bet North |
| 9 | Tue 1 Jan 2013 | 192-1 v WorkingtonWorkington 1-2 Harrogate Town | Blue Square Bet North |
| 10 | Sat 5 Jan 2013 | 190-3 v AltrinchamAltrincham 3-0 Harrogate Town | Blue Square Bet North |
| 11 | Tue 8 Jan 2013 | 192-1 v Boston UnitedBoston United 1-2 Harrogate Town | Blue Square Bet North |
| 12 | Sat 16 Feb 2013 | 193-1 v Worcester CityHarrogate Town 3-1 Worcester City | Blue Square Bet North |
| 13 | Tue 19 Feb 2013 | 191-1 v DroylsdenHarrogate Town 1-1 Droylsden | Blue Square Bet North |
| 14 | Sat 23 Feb 2013 | 192-0 v Gloucester CityGloucester City 0-2 Harrogate Town | Blue Square Bet North |
| 15 | Tue 26 Feb 2013 | 194-2 v Boston UnitedHarrogate Town 4-2 Boston United | Blue Square Bet North |
| 16 | Sat 2 Mar 2013 | 192-0 v HistonHarrogate Town 2-0 Histon | Blue Square Bet North |
| 17 | Tue 5 Mar 2013 | 191-2 v Colwyn BayHarrogate Town 1-2 Colwyn Bay | Blue Square Bet North |
| 18 | Thu 7 Mar 2013 | 192-1 v FC Halifax TownFC Halifax Town 1-2 Harrogate Town | Blue Square Bet North |
| 19 | Sat 9 Mar 2013 | 1-3 v ChesterHarrogate Town 1-3 Chester | Blue Square Bet North |
| 20 | Tue 12 Mar 2013 | 2-2 v Bishop's StortfordHarrogate Town 2-2 Bishop's Stortford | Blue Square Bet North |
| 21 | Sat 16 Mar 2013 | 2-0 v Corby TownCorby Town 0-2 Harrogate Town | Blue Square Bet North |
| 22 | Tue 19 Mar 2013 | 2-0 v Bishop's StortfordBishop's Stortford 0-2 Harrogate Town | Blue Square Bet North |
| 23 | Mon 1 Apr 2013 | 0-0 v Gainsborough TrinityHarrogate Town 0-0 Gainsborough Trinity | Blue Square Bet North |
| 24 | Wed 3 Apr 2013 | 0-1 v Bradford Park AvenueBradford Park Avenue 1-0 Harrogate Town | Blue Square Bet North |
| 25 | Sat 6 Apr 2013 | 2-4 v Solihull MoorsHarrogate Town 2-4 Solihull Moors | Blue Square Bet North |
| 26 | Tue 9 Apr 2013 | 1-0 v Gloucester CityHarrogate Town 1-0 Gloucester City | Blue Square Bet North |
| 27 | Sat 13 Apr 2013 | 0-0 v Oxford CityOxford City 0-0 Harrogate Town | Blue Square Bet North |
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