| 1 | Sat 6 Aug 2016 | 21-1 v Northampton TownNorthampton Town 1-1 Fleetwood Town | Sky Bet League One |
| 2 | Wed 10 Aug 2016 | 22-2 v Leeds UnitedFleetwood Town 2-2 Leeds United | EFL Cup First Round |
| 3 | Sat 13 Aug 2016 | 22-2 v Scunthorpe UnitedFleetwood Town 2-2 Scunthorpe United | Sky Bet League One |
| 4 | Wed 17 Aug 2016 | 22-0 v Oxford UnitedFleetwood Town 2-0 Oxford United | Sky Bet League One |
| 5 | Sat 20 Aug 2016 | 21-2 v Bolton WanderersBolton Wanderers 2-1 Fleetwood Town | Sky Bet League One |
| 6 | Sat 27 Aug 2016 | 22-0 v Southend UnitedSouthend United 0-2 Fleetwood Town | Sky Bet League One |
| 7 | Sat 10 Sep 2016 | 22-2 v Charlton AthleticFleetwood Town 2-2 Charlton Athletic | Sky Bet League One |
| 8 | Sat 17 Sep 2016 | 21-2 v RochdaleRochdale 2-1 Fleetwood Town | Sky Bet League One |
| 9 | Sat 24 Sep 2016 | 21-4 v Milton Keynes DonsFleetwood Town 1-4 Milton Keynes Dons | Sky Bet League One |
| 10 | Tue 27 Sep 2016 | 21-2 v Bradford CityBradford City 2-1 Fleetwood Town | Sky Bet League One |
| 11 | Sat 1 Oct 2016 | 21-1 v Sheffield UnitedFleetwood Town 1-1 Sheffield United | Sky Bet League One |
| 12 | Sat 15 Oct 2016 | 22-0 v Peterborough UnitedFleetwood Town 2-0 Peterborough United | Sky Bet League One |
| 13 | Tue 18 Oct 2016 | 21-0 v ChesterfieldChesterfield 0-1 Fleetwood Town | Sky Bet League One |
| 14 | Sat 22 Oct 2016 | 21-2 v MillwallMillwall 2-1 Fleetwood Town | Sky Bet League One |
| 15 | Sat 29 Oct 2016 | 22-1 v GillinghamFleetwood Town 2-1 Gillingham | Sky Bet League One |
| 16 | Tue 1 Nov 2016 | 21-2 v Bristol RoversBristol Rovers 2-1 Fleetwood Town | Sky Bet League One |
| 17 | Sat 19 Nov 2016 | 22-1 v ChesterfieldFleetwood Town 2-1 Chesterfield | Sky Bet League One |
| 18 | Tue 22 Nov 2016 | 23-0 v Shrewsbury TownFleetwood Town 3-0 Shrewsbury Town | Sky Bet League One |
| 19 | Sat 26 Nov 2016 | 22-2 v AFC WimbledonAFC Wimbledon 2-2 Fleetwood Town | Sky Bet League One |
| 20 | Sat 3 Dec 2016 | 20-0 v Shrewsbury TownShrewsbury Town 0-0 Fleetwood Town | Emirates FA Cup Second Round |
| 21 | Sat 10 Dec 2016 | 22-1 v WalsallFleetwood Town 2-1 Walsall | Sky Bet League One |
| 22 | Tue 13 Dec 2016 | 23-2 v Shrewsbury TownFleetwood Town 3-2 Shrewsbury Town | Emirates FA Cup Second Round |
| 23 | Sat 17 Dec 2016 | 21-1 v Swindon TownSwindon Town 1-1 Fleetwood Town | Sky Bet League One |
| 24 | Mon 26 Dec 2016 | 20-0 v BuryFleetwood Town 0-0 Bury | Sky Bet League One |
| 25 | Sat 31 Dec 2016 | 21-0 v Oldham AthleticFleetwood Town 1-0 Oldham Athletic | Sky Bet League One |
| 26 | Mon 2 Jan 2017 | 21-0 v Shrewsbury TownShrewsbury Town 0-1 Fleetwood Town | Sky Bet League One |
| 27 | Sat 7 Jan 2017 | 20-0 v Bristol CityBristol City 0-0 Fleetwood Town | Emirates FA Cup Third Round |
| 28 | Sat 14 Jan 2017 | 23-1 v Bristol RoversFleetwood Town 3-1 Bristol Rovers | Sky Bet League One |
| 29 | Tue 17 Jan 2017 | 20-1 v Bristol CityFleetwood Town 0-1 Bristol City | Emirates FA Cup Third Round Replay |
| 30 | Sat 21 Jan 2017 | 21-0 v Coventry CityCoventry City 0-1 Fleetwood Town | Sky Bet League One |
| 31 | Tue 24 Jan 2017 | 22-0 v Sheffield UnitedSheffield United 0-2 Fleetwood Town | Sky Bet League One |
| 32 | Sat 28 Jan 2017 | 21-1 v Southend UnitedFleetwood Town 1-1 Southend United | Sky Bet League One |
| 33 | Sat 4 Feb 2017 | 21-1 v Charlton AthleticCharlton Athletic 1-1 Fleetwood Town | Sky Bet League One |
| 34 | Tue 14 Feb 2017 | 22-1 v Bradford CityFleetwood Town 2-1 Bradford City | Sky Bet League One |
| 35 | Sat 18 Feb 2017 | 21-0 v Milton Keynes DonsMilton Keynes Dons 0-1 Fleetwood Town | Sky Bet League One |
| 36 | Sat 25 Feb 2017 | 23-0 v Northampton TownFleetwood Town 3-0 Northampton Town | Sky Bet League One |
| 37 | Sat 4 Mar 2017 | 22-0 v Scunthorpe UnitedScunthorpe United 0-2 Fleetwood Town | Sky Bet League One |
| 38 | Sat 11 Mar 2017 | 22-4 v Bolton WanderersFleetwood Town 2-4 Bolton Wanderers | Sky Bet League One |
| 39 | Tue 14 Mar 2017 | 21-0 v WalsallWalsall 0-1 Fleetwood Town | Sky Bet League One |
| 40 | Sat 18 Mar 2017 | 20-0 v AFC WimbledonFleetwood Town 0-0 AFC Wimbledon | Sky Bet League One |
| 41 | Sat 1 Apr 2017 | 20-1 v Swindon TownFleetwood Town 0-1 Swindon Town | Sky Bet League One |
| 42 | Wed 5 Apr 2017 | 23-1 v Oxford UnitedOxford United 1-3 Fleetwood Town | Sky Bet League One |
| 43 | Sat 8 Apr 2017 | 20-2 v Oldham AthleticOldham Athletic 2-0 Fleetwood Town | Sky Bet League One |
| 44 | Fri 14 Apr 2017 | 22-1 v Peterborough UnitedPeterborough United 1-2 Fleetwood Town | Sky Bet League One |
| 45 | Mon 17 Apr 2017 | 21-0 v MillwallFleetwood Town 1-0 Millwall | Sky Bet League One |
| 46 | Sat 22 Apr 2017 | 23-2 v GillinghamGillingham 2-3 Fleetwood Town | Sky Bet League One |
| 47 | Sun 30 Apr 2017 | 20-0 v Port ValeFleetwood Town 0-0 Port Vale | Sky Bet League One |
| 48 | Thu 4 May 2017 | 20-1 v Bradford CityBradford City 1-0 Fleetwood Town | Sky Bet League One Play-off |
| 49 | Sun 7 May 2017 | 20-0 v Bradford CityFleetwood Town 0-0 Bradford City | Sky Bet League One Play-off |
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