| 1 | Sat 3 Sep 2016 | 3-2 v Colchester UnitedColchester United 2-3 Exeter City | Sky Bet League Two |
| 2 | Sat 17 Sep 2016 | 290-2 v Plymouth ArgyleExeter City 0-2 Plymouth Argyle | Sky Bet League Two |
| 3 | Sat 24 Sep 2016 | 292-0 v StevenageStevenage 0-2 Exeter City | Sky Bet League Two |
| 4 | Tue 27 Sep 2016 | 290-2 v Notts CountyExeter City 0-2 Notts County | Sky Bet League Two |
| 5 | Sat 1 Oct 2016 | 290-1 v Wycombe WanderersWycombe Wanderers 1-0 Exeter City | Sky Bet League Two |
| 6 | Sat 8 Oct 2016 | 290-0 v Grimsby TownExeter City 0-0 Grimsby Town | Sky Bet League Two |
| 7 | Sat 15 Oct 2016 | 294-1 v BarnetBarnet 1-4 Exeter City | Sky Bet League Two |
| 8 | Sat 22 Oct 2016 | 291-2 v Cambridge UnitedExeter City 1-2 Cambridge United | Sky Bet League Two |
| 9 | Sat 29 Oct 2016 | 293-0 v MorecambeMorecambe 0-3 Exeter City | Sky Bet League Two |
| 10 | Sat 19 Nov 2016 | 292-3 v Carlisle UnitedCarlisle United 3-2 Exeter City | Sky Bet League Two |
| 11 | Tue 22 Nov 2016 | 291-0 v Leyton OrientLeyton Orient 0-1 Exeter City | Sky Bet League Two |
| 12 | Sat 14 Jan 2017 | 63-0 v Grimsby TownGrimsby Town 0-3 Exeter City | Sky Bet League Two |
| 13 | Sat 4 Feb 2017 | 294-0 v Crewe AlexandraExeter City 4-0 Crewe Alexandra | Sky Bet League Two |
| 14 | Sat 11 Mar 2017 | 290-2 v Accrington StanleyExeter City 0-2 Accrington Stanley | Sky Bet League Two |
| 15 | Sat 18 Mar 2017 | 291-1 v Luton TownLuton Town 1-1 Exeter City | Sky Bet League Two |
| 16 | Sat 1 Apr 2017 | 292-1 v Mansfield TownMansfield Town 1-2 Exeter City | Sky Bet League Two |
| 17 | Sat 8 Apr 2017 | 290-1 v Newport CountyExeter City 0-1 Newport County | Sky Bet League Two |
| 18 | Fri 14 Apr 2017 | 292-1 v BarnetExeter City 2-1 Barnet | Sky Bet League Two |
| 19 | Mon 17 Apr 2017 | 290-1 v Cambridge UnitedCambridge United 1-0 Exeter City | Sky Bet League Two |
| 20 | Sat 6 May 2017 | 292-3 v Carlisle UnitedExeter City 2-3 Carlisle United | Sky Bet League Two |
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