| 1 | Sat 6 Aug 2016 | 10-2 v BlackpoolBlackpool 2-0 Exeter City | Sky Bet League Two |
| 2 | Tue 9 Aug 2016 | 11-0 v BrentfordExeter City 1-0 Brentford | EFL Cup First Round |
| 3 | Sat 13 Aug 2016 | 11-2 v Hartlepool UnitedExeter City 1-2 Hartlepool United | Sky Bet League Two |
| 4 | Tue 16 Aug 2016 | 10-1 v Crawley TownExeter City 0-1 Crawley Town | Sky Bet League Two |
| 5 | Sat 20 Aug 2016 | 12-1 v Accrington StanleyAccrington Stanley 1-2 Exeter City | Sky Bet League Two |
| 6 | Sat 27 Aug 2016 | 10-1 v PortsmouthExeter City 0-1 Portsmouth | Sky Bet League Two |
| 7 | Tue 30 Aug 2016 | 12-4 v Oxford UnitedOxford United 4-2 Exeter City | Checkatrade Trophy Southern Group C |
| 8 | Sat 3 Sep 2016 | 13-2 v Colchester UnitedColchester United 2-3 Exeter City | Sky Bet League Two |
| 9 | Sat 10 Sep 2016 | 10-2 v Crewe AlexandraCrewe Alexandra 2-0 Exeter City | Sky Bet League Two |
| 10 | Sat 17 Sep 2016 | 10-2 v Plymouth ArgyleExeter City 0-2 Plymouth Argyle | Sky Bet League Two |
| 11 | Sat 24 Sep 2016 | 12-0 v StevenageStevenage 0-2 Exeter City | Sky Bet League Two |
| 12 | Tue 27 Sep 2016 | 10-2 v Notts CountyExeter City 0-2 Notts County | Sky Bet League Two |
| 13 | Sat 1 Oct 2016 | 10-1 v Wycombe WanderersWycombe Wanderers 1-0 Exeter City | Sky Bet League Two |
| 14 | Sat 29 Oct 2016 | 13-0 v MorecambeMorecambe 0-3 Exeter City | Sky Bet League Two |
| 15 | Sat 5 Nov 2016 | 11-3 v Luton TownExeter City 1-3 Luton Town | Emirates FA Cup First Round |
| 16 | Sat 18 Feb 2017 | 11-1 v StevenageExeter City 1-1 Stevenage | Sky Bet League Two |
| 17 | Tue 28 Feb 2017 | 12-1 v Crawley TownCrawley Town 1-2 Exeter City | Sky Bet League Two |
| 18 | Sat 4 Mar 2017 | 11-3 v Hartlepool UnitedHartlepool United 3-1 Exeter City | Sky Bet League Two |
| 19 | Sat 11 Mar 2017 | 10-2 v Accrington StanleyExeter City 0-2 Accrington Stanley | Sky Bet League Two |
| 20 | Tue 14 Mar 2017 | 13-0 v Cheltenham TownExeter City 3-0 Cheltenham Town | Sky Bet League Two |
| 21 | Sat 18 Mar 2017 | 11-1 v Luton TownLuton Town 1-1 Exeter City | Sky Bet League Two |
| 22 | Sun 14 May 2017 | 13-3 v Carlisle UnitedCarlisle United 3-3 Exeter City | Sky Bet League Two Play-off |
| 23 | Thu 18 May 2017 | 13-2 v Carlisle UnitedExeter City 3-2 Carlisle United | Sky Bet League Two Play-off |
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