| 1 | Fri 1 Feb 2013 | 210-4 v Macclesfield TownEbbsfleet United 0-4 Macclesfield Town | Blue Square Bet Premier |
| 2 | Sat 9 Feb 2013 | 213-1 v GatesheadEbbsfleet United 3-1 Gateshead | Blue Square Bet Premier |
| 3 | Sat 16 Feb 2013 | 210-0 v Stockport CountyEbbsfleet United 0-0 Stockport County | Blue Square Bet Premier |
| 4 | Tue 19 Feb 2013 | 211-0 v Hereford UnitedEbbsfleet United 1-0 Hereford United | Blue Square Bet Premier |
| 5 | Tue 26 Feb 2013 | 211-3 v Grimsby TownGrimsby Town 3-1 Ebbsfleet United | Blue Square Bet Premier |
| 6 | Sat 2 Mar 2013 | 212-3 v Kidderminster HarriersKidderminster Harriers 3-2 Ebbsfleet United | Blue Square Bet Premier |
| 7 | Tue 5 Mar 2013 | 211-4 v WrexhamWrexham 4-1 Ebbsfleet United | Blue Square Bet Premier |
| 8 | Mon 1 Apr 2013 | 211-3 v Braintree TownBraintree Town 3-1 Ebbsfleet United | Blue Square Bet Premier |
| 9 | Wed 3 Apr 2013 | 211-1 v BarrowBarrow 1-1 Ebbsfleet United | Blue Square Bet Premier |
| 10 | Sat 6 Apr 2013 | 211-1 v Nuneaton TownEbbsfleet United 1-1 Nuneaton Town | Blue Square Bet Premier |
| 11 | Tue 9 Apr 2013 | 210-1 v HydeHyde 1-0 Ebbsfleet United | Blue Square Bet Premier |
| 12 | Sat 13 Apr 2013 | 211-3 v AFC Telford UnitedEbbsfleet United 1-3 AFC Telford United | Blue Square Bet Premier |
| 13 | Thu 18 Apr 2013 | 210-2 v Luton TownLuton Town 2-0 Ebbsfleet United | Blue Square Bet Premier |
| 14 | Sat 20 Apr 2013 | 210-2 v GatesheadGateshead 2-0 Ebbsfleet United | Blue Square Bet Premier |
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