| 1 | Sat 27 Jul 2013 | 1-3 v Dunfermline AthleticCowdenbeath 1-3 Dunfermline Athletic | Ramsdens Cup First Round South-West |
| 2 | Sat 3 Aug 2013 | 5-0 v Berwick RangersBerwick Rangers 0-5 Cowdenbeath | Scottish Communities Cup First Round |
| 3 | Sat 10 Aug 2013 | 0-2 v MortonMorton 2-0 Cowdenbeath | Scottish Championship |
| 4 | Sat 17 Aug 2013 | 103-4 v Raith RoversCowdenbeath 3-4 Raith Rovers | Scottish Championship |
| 5 | Sat 24 Aug 2013 | 101-3 v Alloa AthleticAlloa Athletic 3-1 Cowdenbeath | Scottish Championship |
| 6 | Tue 27 Aug 2013 | 101-3 v Partick ThistlePartick Thistle 3-1 Cowdenbeath | Scottish Communities Cup Second Round |
| 7 | Sat 14 Sep 2013 | 101-0 v FalkirkCowdenbeath 1-0 Falkirk | Scottish Championship |
| 8 | Sat 28 Sep 2013 | 101-5 v LivingstonLivingston 5-1 Cowdenbeath | Scottish Championship |
| 9 | Sat 19 Oct 2013 | 105-1 v MortonCowdenbeath 5-1 Morton | Scottish Championship |
| 10 | Sat 2 Nov 2013 | 101-2 v DumbartonDumbarton 2-1 Cowdenbeath | Scottish FA Cup Third Round |
| 11 | Sat 16 Nov 2013 | 102-4 v Hamilton AcademicalCowdenbeath 2-4 Hamilton Academical | Scottish Championship |
| 12 | Sat 23 Nov 2013 | 100-4 v FalkirkFalkirk 4-0 Cowdenbeath | Scottish Championship |
| 13 | Sat 14 Dec 2013 | 102-1 v DundeeDundee 1-2 Cowdenbeath | Scottish Championship |
| 14 | Sat 21 Dec 2013 | 103-3 v Raith RoversRaith Rovers 3-3 Cowdenbeath | Scottish Championship |
| 15 | Sat 28 Dec 2013 | 100-2 v Queen of the SouthCowdenbeath 0-2 Queen of the South | Scottish Championship |
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