| 1 | Tue 2 Sep | 24 2-1 v Wycombe WanderersWycombe Wanderers 1-2 Colchester United | EFL Trophy Southern Group G |
| 2 | Sat 6 Sep | 241-1 v Crewe AlexandraColchester United 1-1 Crewe Alexandra | Sky Bet League Two |
| 3 | Sat 13 Sep | 24 0-1 v Accrington StanleyAccrington Stanley 1-0 Colchester United | Sky Bet League Two |
| 4 | Sat 20 Sep | 241-1 v Bristol RoversColchester United 1-1 Bristol Rovers | Sky Bet League Two |
| 5 | Sat 27 Sep | 242-4 v Fleetwood TownFleetwood Town 4-2 Colchester United | Sky Bet League Two |
| 6 | Sat 4 Oct | 246-2 v ChesterfieldColchester United 6-2 Chesterfield | Sky Bet League Two |
| 7 | Tue 7 Oct | 242-1 v GillinghamColchester United 2-1 Gillingham | EFL Trophy Southern Group G |
| 8 | Sat 11 Oct | 242-1 v Grimsby TownGrimsby Town 1-2 Colchester United | Sky Bet League Two |
| 9 | Sat 18 Oct | 243-1 v Harrogate TownColchester United 3-1 Harrogate Town | Sky Bet League Two |
| 10 | Sat 25 Oct | 240-0 v Swindon TownSwindon Town 0-0 Colchester United | Sky Bet League Two |
| 11 | Sat 1 Nov | 242-3 v Milton Keynes DonsColchester United 2-3 Milton Keynes Dons | Emirates FA Cup First Round |
| 12 | Sat 8 Nov | 240-2 v BromleyColchester United 0-2 Bromley | Sky Bet League Two |
| 13 | Sat 15 Nov | 242-0 v WalsallWalsall 0-2 Colchester United | Sky Bet League Two |
| 14 | Sat 22 Nov | 243-1 v Notts CountyNotts County 1-3 Colchester United | Sky Bet League Two |
| 15 | Sat 29 Nov | 242-0 v Cheltenham TownColchester United 2-0 Cheltenham Town | Sky Bet League Two |
| 16 | Sat 6 Dec | 240-0 v GillinghamColchester United 0-0 Gillingham | Sky Bet League Two |
| 17 | Sat 13 Dec | 243-4 v Salford CitySalford City 4-3 Colchester United | Sky Bet League Two |
| 18 | Sat 20 Dec | 244-1 v Newport CountyColchester United 4-1 Newport County | Sky Bet League Two |
| 19 | Fri 26 Dec | 241-1 v Crawley TownCrawley Town 1-1 Colchester United | Sky Bet League Two |
| 20 | Mon 29 Dec | 241-1 v GillinghamGillingham 1-1 Colchester United | Sky Bet League Two |
| 21 | Thu 1 Jan | 241-0 v Milton Keynes DonsColchester United 1-0 Milton Keynes Dons | Sky Bet League Two |
| 22 | Sat 17 Jan | 241-0 v Bristol RoversBristol Rovers 0-1 Colchester United | Sky Bet League Two |
| 23 | Sat 24 Jan | 242-1 v Fleetwood TownColchester United 2-1 Fleetwood Town | Sky Bet League Two |
| 24 | Tue 27 Jan | 24 0-1 v Grimsby TownColchester United 0-1 Grimsby Town | Sky Bet League Two |
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