| 1 | Tue 9 Aug 2016 | 140-4 v Brighton & Hove AlbionBrighton & Hove Albion 4-0 Colchester United | EFL Cup First Round |
| 2 | Sat 27 Aug 2016 | 142-0 v Wycombe WanderersWycombe Wanderers 0-2 Colchester United | Sky Bet League Two |
| 3 | Tue 30 Aug 2016 | 140-1 v Crawley TownCrawley Town 1-0 Colchester United | Checkatrade Trophy Southern Group E |
| 4 | Sat 8 Oct 2016 | 140-0 v Newport CountyColchester United 0-0 Newport County | Sky Bet League Two |
| 5 | Sat 15 Oct 2016 | 140-1 v Doncaster RoversDoncaster Rovers 1-0 Colchester United | Sky Bet League Two |
| 6 | Sat 22 Oct 2016 | 142-2 v MorecambeColchester United 2-2 Morecambe | Sky Bet League Two |
| 7 | Sat 29 Oct 2016 | 141-2 v Plymouth ArgylePlymouth Argyle 2-1 Colchester United | Sky Bet League Two |
| 8 | Sat 5 Nov 2016 | 141-2 v ChesterfieldColchester United 1-2 Chesterfield | Emirates FA Cup First Round |
| 9 | Sat 12 Nov 2016 | 140-3 v Leyton OrientColchester United 0-3 Leyton Orient | Sky Bet League Two |
| 10 | Sat 19 Nov 2016 | 141-2 v Yeovil TownYeovil Town 2-1 Colchester United | Sky Bet League Two |
| 11 | Sat 11 Feb 2017 | 142-1 v BarnetColchester United 2-1 Barnet | Sky Bet League Two |
| 12 | Tue 14 Feb 2017 | 142-3 v Crawley TownColchester United 2-3 Crawley Town | Sky Bet League Two |
| 13 | Sat 18 Feb 2017 | 141-2 v Accrington StanleyAccrington Stanley 2-1 Colchester United | Sky Bet League Two |
| 14 | Tue 14 Mar 2017 | 142-0 v Mansfield TownColchester United 2-0 Mansfield Town | Sky Bet League Two |
| 15 | Sat 25 Mar 2017 | 142-1 v Luton TownColchester United 2-1 Luton Town | Sky Bet League Two |
| 16 | Mon 17 Apr 2017 | 141-1 v MorecambeMorecambe 1-1 Colchester United | Sky Bet League Two |
| 17 | Sat 29 Apr 2017 | 143-1 v Leyton OrientLeyton Orient 1-3 Colchester United | Sky Bet League Two |
| 18 | Sat 6 May 2017 | 142-0 v Yeovil TownColchester United 2-0 Yeovil Town | Sky Bet League Two |
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