| 1 | Sat 18 Aug 2012 | 1-0 v Oxford CityOxford City 0-1 Chester | Blue Square Bet North |
| 2 | Wed 22 Aug 2012 | 1-0 v WorkingtonChester 1-0 Workington | Blue Square Bet North |
| 3 | Sat 25 Aug 2012 | 2-1 v Colwyn BayChester 2-1 Colwyn Bay | Blue Square Bet North |
| 4 | Mon 27 Aug 2012 | 4-2 v AltrinchamAltrincham 2-4 Chester | Blue Square Bet North |
| 5 | Sat 1 Sep 2012 | 3-0 v Solihull MoorsSolihull Moors 0-3 Chester | Blue Square Bet North |
| 6 | Sat 8 Sep 2012 | 4-0 v GuiseleyChester 4-0 Guiseley | Blue Square Bet North |
| 7 | Sat 15 Sep 2012 | 2-3 v Boston UnitedBoston United 3-2 Chester | Blue Square Bet North |
| 8 | Sat 29 Sep 2012 | 6-2 v Stalybridge CelticStalybridge Celtic 2-6 Chester | Blue Square Bet North |
| 9 | Sat 27 Oct 2012 | 2-1 v HistonChester 2-1 Histon | Blue Square Bet North |
| 10 | Wed 28 Nov 2012 | 2-1 v Corby TownChester 2-1 Corby Town | Blue Square Bet North |
| 11 | Sat 1 Dec 2012 | 4-2 v Worcester CityChester 4-2 Worcester City | Blue Square Bet North |
| 12 | Wed 19 Dec 2012 | 2-0 v Harrogate TownChester 2-0 Harrogate Town | Blue Square Bet North |
| 13 | Wed 26 Dec 2012 | 5-0 v DroylsdenChester 5-0 Droylsden | Blue Square Bet North |
| 14 | Sat 29 Dec 2012 | 3-0 v Hinckley UnitedChester 3-0 Hinckley United | Blue Square Bet North |
| 15 | Wed 9 Jan 2013 | 2-0 v Oxford CityChester 2-0 Oxford City | Blue Square Bet North |
| 16 | Sat 2 Feb 2013 | 0-0 v Brackley TownChester 0-0 Brackley Town | Blue Square Bet North |
| 17 | Tue 19 Feb 2013 | 1-1 v WorkingtonWorkington 1-1 Chester | Blue Square Bet North |
| 18 | Sat 23 Feb 2013 | 2-0 v Vauxhall MotorsChester 2-0 Vauxhall Motors | Blue Square Bet North |
| 19 | Sat 30 Mar 2013 | 5-1 v Colwyn BayColwyn Bay 1-5 Chester | Blue Square Bet North |
| 20 | Sat 20 Apr 2013 | 0-1 v Solihull MoorsChester 0-1 Solihull Moors | Blue Square Bet North |
| 21 | Thu 25 Apr 2013 | 1-1 v FC Halifax TownFC Halifax Town 1-1 Chester | Blue Square Bet North |
| 22 | Sat 27 Apr 2013 | 1-0 v Worcester CityWorcester City 0-1 Chester | Blue Square Bet North |
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