| 1 | Sat 10 Aug 2013 | 41-1 v Hereford UnitedHereford United 1-1 Braintree Town | Skrill Premier |
| 2 | Tue 13 Aug 2013 | 42-0 v WokingBraintree Town 2-0 Woking | Skrill Premier |
| 3 | Sat 17 Aug 2013 | 40-1 v Kidderminster HarriersBraintree Town 0-1 Kidderminster Harriers | Skrill Premier |
| 4 | Sat 24 Aug 2013 | 42-0 v DartfordDartford 0-2 Braintree Town | Skrill Premier |
| 5 | Mon 26 Aug 2013 | 40-3 v BarnetBraintree Town 0-3 Barnet | Skrill Premier |
| 6 | Sat 31 Aug 2013 | 41-0 v Macclesfield TownMacclesfield Town 0-1 Braintree Town | Skrill Premier |
| 7 | Sat 7 Sep 2013 | 41-1 v Forest Green RoversBraintree Town 1-1 Forest Green Rovers | Skrill Premier |
| 8 | Sat 14 Sep 2013 | 40-1 v Grimsby TownGrimsby Town 1-0 Braintree Town | Skrill Premier |
| 9 | Tue 17 Sep 2013 | 41-1 v Salisbury CitySalisbury City 1-1 Braintree Town | Skrill Premier |
| 10 | Sat 21 Sep 2013 | 41-0 v SouthportBraintree Town 1-0 Southport | Skrill Premier |
| 11 | Tue 24 Sep 2013 | 43-2 v WrexhamWrexham 2-3 Braintree Town | Skrill Premier |
| 12 | Sat 28 Sep 2013 | 43-1 v Alfreton TownBraintree Town 3-1 Alfreton Town | Skrill Premier |
| 13 | Sat 5 Oct 2013 | 43-0 v HydeHyde 0-3 Braintree Town | Skrill Premier |
| 14 | Tue 8 Oct 2013 | 42-3 v Welling UnitedBraintree Town 2-3 Welling United | Skrill Premier |
| 15 | Sat 12 Oct 2013 | 41-1 v Nuneaton TownNuneaton Town 1-1 Braintree Town | Skrill Premier |
| 16 | Sat 19 Oct 2013 | 43-0 v ChesterBraintree Town 3-0 Chester | Skrill Premier |
| 17 | Sat 2 Nov 2013 | 40-0 v TamworthTamworth 0-0 Braintree Town | Skrill Premier |
| 18 | Sat 9 Nov 2013 | 41-1 v Newport CountyBraintree Town 1-1 Newport County | FA Cup with Budweiser First Round |
| 19 | Tue 12 Nov 2013 | 41-2 v Luton TownBraintree Town 1-2 Luton Town | Skrill Premier |
| 20 | Sat 16 Nov 2013 | 41-3 v Alfreton TownAlfreton Town 3-1 Braintree Town | Skrill Premier |
| 21 | Tue 19 Nov 2013 | 40-1 v Newport CountyNewport County 1-0 Braintree Town | FA Cup with Budweiser First Round |
| 22 | Tue 26 Nov 2013 | 41-2 v Aldershot TownAldershot Town 2-1 Braintree Town | Skrill Premier |
| 23 | Sat 7 Dec 2013 | 42-0 v ChesterChester 0-2 Braintree Town | Skrill Premier |
| 24 | Thu 26 Dec 2013 | 40-1 v Cambridge UnitedCambridge United 1-0 Braintree Town | Skrill Premier |
| 25 | Sat 28 Dec 2013 | 42-0 v TamworthBraintree Town 2-0 Tamworth | Skrill Premier |
| 26 | Sat 11 Jan 2014 | 40-1 v WokingWoking 1-0 Braintree Town | Skrill Premier |
| 27 | Sat 1 Mar 2014 | 42-1 v HydeBraintree Town 2-1 Hyde | Skrill Premier |
| 28 | Tue 11 Mar 2014 | 43-0 v WrexhamBraintree Town 3-0 Wrexham | Skrill Premier |
| 29 | Thu 13 Mar 2014 | 42-0 v Forest Green RoversForest Green Rovers 0-2 Braintree Town | Skrill Premier |
| 30 | Sat 15 Mar 2014 | 40-2 v Lincoln CityLincoln City 2-0 Braintree Town | Skrill Premier |
| 31 | Tue 18 Mar 2014 | 40-2 v Lincoln CityBraintree Town 0-2 Lincoln City | Skrill Premier |
| 32 | Sat 22 Mar 2014 | 41-0 v Aldershot TownBraintree Town 1-0 Aldershot Town | Skrill Premier |
| 33 | Tue 25 Mar 2014 | 42-0 v Welling UnitedWelling United 0-2 Braintree Town | Skrill Premier |
| 34 | Thu 27 Mar 2014 | 42-1 v Nuneaton TownBraintree Town 2-1 Nuneaton Town | Skrill Premier |
| 35 | Sat 29 Mar 2014 | 40-1 v GatesheadGateshead 1-0 Braintree Town | Skrill Premier |
| 36 | Tue 1 Apr 2014 | 44-0 v SouthportSouthport 0-4 Braintree Town | Skrill Premier |
| 37 | Thu 3 Apr 2014 | 40-0 v FC Halifax TownFC Halifax Town 0-0 Braintree Town | Skrill Premier |
| 38 | Sat 5 Apr 2014 | 40-1 v Salisbury CityBraintree Town 0-1 Salisbury City | Skrill Premier |
| 39 | Tue 8 Apr 2014 | 40-1 v Macclesfield TownBraintree Town 0-1 Macclesfield Town | Skrill Premier |
| 40 | Sat 12 Apr 2014 | 43-2 v Luton TownLuton Town 2-3 Braintree Town | Skrill Premier |
| 41 | Tue 15 Apr 2014 | 40-0 v GatesheadBraintree Town 0-0 Gateshead | Skrill Premier |
| 42 | Fri 18 Apr 2014 | 41-0 v DartfordBraintree Town 1-0 Dartford | Skrill Premier |
| 43 | Mon 21 Apr 2014 | 41-1 v BarnetBarnet 1-1 Braintree Town | Skrill Premier |
| 44 | Sat 26 Apr 2014 | 40-0 v Grimsby TownBraintree Town 0-0 Grimsby Town | Skrill Premier |
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