| 1 | Thu 21 Mar 2013 | 332-2 v Nuneaton TownBraintree Town 2-2 Nuneaton Town | Blue Square Bet Premier |
| 2 | Tue 26 Mar 2013 | 330-3 v Lincoln CityBraintree Town 0-3 Lincoln City | Blue Square Bet Premier |
| 3 | Thu 28 Mar 2013 | 332-1 v Alfreton TownBraintree Town 2-1 Alfreton Town | Blue Square Bet Premier |
| 4 | Sat 30 Mar 2013 | 331-2 v Kidderminster HarriersKidderminster Harriers 2-1 Braintree Town | Blue Square Bet Premier |
| 5 | Mon 1 Apr 2013 | 333-1 v Ebbsfleet UnitedBraintree Town 3-1 Ebbsfleet United | Blue Square Bet Premier |
| 6 | Wed 3 Apr 2013 | 331-3 v SouthportBraintree Town 1-3 Southport | Blue Square Bet Premier |
| 7 | Sat 6 Apr 2013 | 332-1 v HydeHyde 1-2 Braintree Town | Blue Square Bet Premier |
| 8 | Tue 9 Apr 2013 | 330-1 v Newport CountyNewport County 1-0 Braintree Town | Blue Square Bet Premier |
| 9 | Thu 11 Apr 2013 | 330-0 v DartfordDartford 0-0 Braintree Town | Blue Square Bet Premier |
| 10 | Sat 13 Apr 2013 | 332-1 v Mansfield TownBraintree Town 2-1 Mansfield Town | Blue Square Bet Premier |
| 11 | Tue 16 Apr 2013 | 331-1 v WrexhamWrexham 1-1 Braintree Town | Blue Square Bet Premier |
| 12 | Sat 20 Apr 2013 | 331-0 v BarrowBarrow 0-1 Braintree Town | Blue Square Bet Premier |
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