| 1 | Sat 6 Aug 2016 | 81-0 v Sheffield UnitedBolton Wanderers 1-0 Sheffield United | Sky Bet League One |
| 2 | Sat 13 Aug 2016 | 82-1 v AFC WimbledonAFC Wimbledon 1-2 Bolton Wanderers | Sky Bet League One |
| 3 | Wed 17 Aug 2016 | 82-1 v Bristol RoversBristol Rovers 1-2 Bolton Wanderers | Sky Bet League One |
| 4 | Sat 20 Aug 2016 | 82-1 v Fleetwood TownBolton Wanderers 2-1 Fleetwood Town | Sky Bet League One |
| 5 | Sat 27 Aug 2016 | 81-1 v Charlton AthleticCharlton Athletic 1-1 Bolton Wanderers | Sky Bet League One |
| 6 | Sat 3 Sep 2016 | 81-1 v Southend UnitedBolton Wanderers 1-1 Southend United | Sky Bet League One |
| 7 | Sat 10 Sep 2016 | 81-1 v Milton Keynes DonsBolton Wanderers 1-1 Milton Keynes Dons | Sky Bet League One |
| 8 | Sat 24 Sep 2016 | 80-0 v Bradford CityBolton Wanderers 0-0 Bradford City | Sky Bet League One |
| 9 | Tue 27 Sep 2016 | 80-1 v RochdaleRochdale 1-0 Bolton Wanderers | Sky Bet League One |
| 10 | Sat 1 Oct 2016 | 80-2 v Oxford UnitedBolton Wanderers 0-2 Oxford United | Sky Bet League One |
| 11 | Sat 8 Oct 2016 | 81-0 v Swindon TownSwindon Town 0-1 Bolton Wanderers | Sky Bet League One |
| 12 | Sat 15 Oct 2016 | 82-0 v Oldham AthleticBolton Wanderers 2-0 Oldham Athletic | Sky Bet League One |
| 13 | Tue 18 Oct 2016 | 82-0 v MillwallMillwall 0-2 Bolton Wanderers | Sky Bet League One |
| 14 | Mon 24 Oct 2016 | 82-0 v BuryBury 0-2 Bolton Wanderers | Sky Bet League One |
| 15 | Sat 29 Oct 2016 | 83-1 v Port ValeBolton Wanderers 3-1 Port Vale | Sky Bet League One |
| 16 | Sat 19 Nov 2016 | 82-0 v MillwallBolton Wanderers 2-0 Millwall | Sky Bet League One |
| 17 | Tue 22 Nov 2016 | 81-0 v Coventry CityBolton Wanderers 1-0 Coventry City | Sky Bet League One |
| 18 | Sat 26 Nov 2016 | 81-0 v Northampton TownNorthampton Town 0-1 Bolton Wanderers | Sky Bet League One |
| 19 | Sun 4 Dec 2016 | 83-2 v Sheffield UnitedBolton Wanderers 3-2 Sheffield United | Emirates FA Cup Second Round |
| 20 | Mon 12 Dec 2016 | 84-0 v GillinghamBolton Wanderers 4-0 Gillingham | Sky Bet League One |
| 21 | Sat 17 Dec 2016 | 80-1 v ChesterfieldChesterfield 1-0 Bolton Wanderers | Sky Bet League One |
| 22 | Mon 26 Dec 2016 | 82-1 v Shrewsbury TownBolton Wanderers 2-1 Shrewsbury Town | Sky Bet League One |
| 23 | Sat 31 Dec 2016 | 82-1 v Scunthorpe UnitedBolton Wanderers 2-1 Scunthorpe United | Sky Bet League One |
| 24 | Mon 2 Jan 2017 | 82-2 v Coventry CityCoventry City 2-2 Bolton Wanderers | Sky Bet League One |
| 25 | Sat 7 Jan 2017 | 80-0 v Crystal PalaceBolton Wanderers 0-0 Crystal Palace | Emirates FA Cup Third Round |
| 26 | Sat 14 Jan 2017 | 81-2 v Swindon TownBolton Wanderers 1-2 Swindon Town | Sky Bet League One |
| 27 | Tue 17 Jan 2017 | 81-2 v Crystal PalaceCrystal Palace 2-1 Bolton Wanderers | Emirates FA Cup Third Round Replay |
| 28 | Sat 28 Jan 2017 | 81-2 v Charlton AthleticBolton Wanderers 1-2 Charlton Athletic | Sky Bet League One |
| 29 | Sat 4 Feb 2017 | 81-1 v Milton Keynes DonsMilton Keynes Dons 1-1 Bolton Wanderers | Sky Bet League One |
| 30 | Sat 11 Feb 2017 | 84-1 v WalsallBolton Wanderers 4-1 Walsall | Sky Bet League One |
| 31 | Tue 14 Feb 2017 | 81-0 v RochdaleBolton Wanderers 1-0 Rochdale | Sky Bet League One |
| 32 | Tue 28 Feb 2017 | 81-1 v Bristol RoversBolton Wanderers 1-1 Bristol Rovers | Sky Bet League One |
| 33 | Sat 18 Mar 2017 | 82-1 v Northampton TownBolton Wanderers 2-1 Northampton Town | Sky Bet League One |
| 34 | Tue 21 Mar 2017 | 84-2 v Oxford UnitedOxford United 2-4 Bolton Wanderers | Sky Bet League One |
| 35 | Sat 1 Apr 2017 | 80-0 v ChesterfieldBolton Wanderers 0-0 Chesterfield | Sky Bet League One |
| 36 | Tue 4 Apr 2017 | 81-0 v Southend UnitedSouthend United 0-1 Bolton Wanderers | Sky Bet League One |
| 37 | Sat 8 Apr 2017 | 80-1 v Scunthorpe UnitedScunthorpe United 1-0 Bolton Wanderers | Sky Bet League One |
| 38 | Sat 15 Apr 2017 | 80-1 v Oldham AthleticOldham Athletic 1-0 Bolton Wanderers | Sky Bet League One |
| 39 | Tue 18 Apr 2017 | 80-0 v BuryBolton Wanderers 0-0 Bury | Sky Bet League One |
| 40 | Sat 22 Apr 2017 | 82-0 v Port ValePort Vale 0-2 Bolton Wanderers | Sky Bet League One |
| 41 | Sun 30 Apr 2017 | 83-0 v Peterborough UnitedBolton Wanderers 3-0 Peterborough United | Sky Bet League One |
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