| 1 | Sat 18 Aug 2012 | 1-4 v Brackley TownAltrincham 1-4 Brackley Town | Blue Square Bet North |
| 2 | Tue 21 Aug 2012 | 2-1 v Harrogate TownHarrogate Town 1-2 Altrincham | Blue Square Bet North |
| 3 | Sat 25 Aug 2012 | 1-2 v Vauxhall MotorsVauxhall Motors 2-1 Altrincham | Blue Square Bet North |
| 4 | Mon 27 Aug 2012 | 2-4 v ChesterAltrincham 2-4 Chester | Blue Square Bet North |
| 5 | Sat 1 Sep 2012 | 5-0 v HistonAltrincham 5-0 Histon | Blue Square Bet North |
| 6 | Tue 4 Sep 2012 | 4-2 v Gainsborough TrinityGainsborough Trinity 2-4 Altrincham | Blue Square Bet North |
| 7 | Sat 8 Sep 2012 | 2-2 v Oxford CityOxford City 2-2 Altrincham | Blue Square Bet North |
| 8 | Sat 15 Sep 2012 | 3-1 v Bradford Park AvenueAltrincham 3-1 Bradford Park Avenue | Blue Square Bet North |
| 9 | Sat 29 Sep 2012 | 1-1 v Bishop's StortfordBishop's Stortford 1-1 Altrincham | Blue Square Bet North |
| 10 | Sat 13 Oct 2012 | 5-2 v Corby TownCorby Town 2-5 Altrincham | Blue Square Bet North |
| 11 | Tue 23 Oct 2012 | 1-2 v WorkingtonAltrincham 1-2 Workington | Blue Square Bet North |
| 12 | Sat 27 Oct 2012 | 1-2 v Solihull MoorsSolihull Moors 2-1 Altrincham | Blue Square Bet North |
| 13 | Tue 30 Oct 2012 | 1-3 v GuiseleyAltrincham 1-3 Guiseley | Blue Square Bet North |
| 14 | Thu 15 Nov 2012 | 50-2 v Burton AlbionAltrincham 0-2 Burton Albion | FA Cup with Budweiser First Round Replay |
| 15 | Sat 17 Nov 2012 | 58-0 v Hinckley UnitedAltrincham 8-0 Hinckley United | Blue Square Bet North |
| 16 | Sat 1 Dec 2012 | 53-2 v Boston UnitedBoston United 2-3 Altrincham | Blue Square Bet North |
| 17 | Sat 8 Dec 2012 | 50-1 v Gainsborough TrinityAltrincham 0-1 Gainsborough Trinity | Blue Square Bet North |
| 18 | Sat 15 Dec 2012 | 51-0 v Brackley TownBrackley Town 0-1 Altrincham | Blue Square Bet North |
| 19 | Wed 26 Dec 2012 | 52-2 v Stalybridge CelticStalybridge Celtic 2-2 Altrincham | Blue Square Bet North |
| 20 | Tue 1 Jan 2013 | 52-1 v Stalybridge CelticAltrincham 2-1 Stalybridge Celtic | Blue Square Bet North |
| 21 | Sat 5 Jan 2013 | 53-0 v Harrogate TownAltrincham 3-0 Harrogate Town | Blue Square Bet North |
| 22 | Sat 12 Jan 2013 | 50-0 v Worcester CityWorcester City 0-0 Altrincham | Blue Square Bet North |
| 23 | Tue 29 Jan 2013 | 57-1 v Boston UnitedAltrincham 7-1 Boston United | Blue Square Bet North |
| 24 | Sat 2 Feb 2013 | 52-0 v Gloucester CityAltrincham 2-0 Gloucester City | Blue Square Bet North |
| 25 | Sat 9 Feb 2013 | 52-1 v Corby TownAltrincham 2-1 Corby Town | Blue Square Bet North |
| 26 | Tue 12 Feb 2013 | 50-2 v HistonHiston 2-0 Altrincham | Blue Square Bet North |
| 27 | Sat 16 Feb 2013 | 51-2 v WorkingtonWorkington 2-1 Altrincham | Blue Square Bet North |
| 28 | Sat 23 Feb 2013 | 51-1 v Colwyn BayAltrincham 1-1 Colwyn Bay | Blue Square Bet North |
| 29 | Tue 26 Feb 2013 | 50-0 v Gloucester CityGloucester City 0-0 Altrincham | Blue Square Bet North |
| 30 | Sat 2 Mar 2013 | 53-1 v Oxford CityAltrincham 3-1 Oxford City | Blue Square Bet North |
| 31 | Tue 5 Mar 2013 | 55-0 v DroylsdenDroylsden 0-5 Altrincham | Blue Square Bet North |
| 32 | Wed 13 Mar 2013 | 52-1 v Solihull MoorsAltrincham 2-1 Solihull Moors | Blue Square Bet North |
| 33 | Sat 16 Mar 2013 | 53-1 v Colwyn BayColwyn Bay 1-3 Altrincham | Blue Square Bet North |
| 34 | Sat 23 Mar 2013 | 52-0 v Worcester CityAltrincham 2-0 Worcester City | Blue Square Bet North |
| 35 | Fri 29 Mar 2013 | 51-0 v Vauxhall MotorsAltrincham 1-0 Vauxhall Motors | Blue Square Bet North |
| 36 | Mon 1 Apr 2013 | 50-2 v ChesterChester 2-0 Altrincham | Blue Square Bet North |
| 37 | Sat 6 Apr 2013 | 54-3 v FC Halifax TownFC Halifax Town 3-4 Altrincham | Blue Square Bet North |
| 38 | Thu 11 Apr 2013 | 51-1 v GuiseleyGuiseley 1-1 Altrincham | Blue Square Bet North |
| 39 | Sat 13 Apr 2013 | 52-1 v Bishop's StortfordAltrincham 2-1 Bishop's Stortford | Blue Square Bet North |
| 40 | Wed 17 Apr 2013 | 52-2 v Bradford Park AvenueBradford Park Avenue 2-2 Altrincham | Blue Square Bet North |
| 41 | Sat 20 Apr 2013 | 56-0 v Hinckley UnitedHinckley United 0-6 Altrincham | Blue Square Bet North |
| 42 | Tue 23 Apr 2013 | 52-0 v FC Halifax TownAltrincham 2-0 FC Halifax Town | Blue Square Bet North |
| 43 | Sat 27 Apr 2013 | 56-0 v DroylsdenAltrincham 6-0 Droylsden | Blue Square Bet North |
| 44 | Tue 30 Apr 2013 | 52-1 v Brackley TownAltrincham 2-1 Brackley Town | Blue Square Bet North Play-off Semi Final |
| 45 | Sat 4 May 2013 | 50-3 v Brackley TownBrackley Town 3-0 Altrincham | Blue Square Bet North Play-off Semi Final |
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